CDS

Accession Number TCMCG065C09861
gbkey CDS
Protein Id XP_004960971.1
Location join(8007518..8007714,8008044..8008160,8008315..8008434,8009852..8010533,8010638..8011050,8012231..8012624)
Gene LOC101781304
GeneID 101781304
Organism Setaria italica

Protein

Length 640aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004960914.1
Definition probable rhamnogalacturonate lyase B [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category S
Description Polysaccharide lyase family 4, domain III
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGCAGGTAGTTGTAGACAATGGCGTGGTGCAGGTGTCGCTGTCGAGGCCGCAGGGCCAGATCACCGGCGTCCGCTACGGCGGCGGCGGCGACCAAAACCTGCTGGAGTACAACGCCAGCCAGGGGAACTCGGGAGGGTACTGGGATGTGGTCTGGAACTACCCTGGCTCGGATCACCCAGGAGGAACGATGGATATGTTGGACGGTACAGAGTTCCAGGTCGTATCCTCAAGTGAGGAGCAAGTGGAGCTTTCCTTCAGGAGCTCATACAACGCGTCGCGTCCAAACAGCGTCCGGCTAAACGTCGACAAGAGGCTTGTGATGCTGAGAGACAGCTCCGGGTTCTACTGCTACGCCATCTTCGAGCACGCCCGGGAGCACCCAGCTCTCAACATCTCCGTGGCTCGCCTCGCTTTCAAACTAAACGCCGCCAAGTTCAACTACATGGCGATCTCGGACGGCATCCAGAGGTACATGCCGAGCGCGGCGGACAGGGACCCACCCCGCGGCGTCCCGCTGGCGTACAAGGAGGCCGTCCTGCTGGTGGACCCCGTGGAGCCGGAGTTCAGAGGGGAGGTGGACGACAAGTACCAGTACTCCATGGACAACGAGGACAACACGGTGCACGGGTGGATCGCCGGCAGCAACGACGACGACCCGGCGGCGGCGACGGGCTTCTGGGTCGTCACTCCCAGCAACGAGTTCAAGAACGGCGGGCCGCTCAAGCGGGAGCTCACCTCCCACGTTGGCCCCACCTCCCTCTCGGTGTTTCTGGGGCCGCATTACGTCGGCAGGGACATGGTGATCGAGTTCGAGGAGGGCGAGTACTGGAAGAAGGTGCTGGGCCCCGTCTTCATCTACCTCAACTCCGGCCGCCCGGACTCCAAGAGAGGCCTCTGGGAGGACGCCAAGGCGCGGGCGCAAGCGGAGGTGAGGAAATGGCCCTACGACTTCCCCCGGTCGCCGGACTTCGCAAAGGCAGGCGAGAGAGGCTCCGTCACGGGGAGGCTCTGGGTCAGAGACGGCGTCGCCAACAAGCAGCAGCAGCCGGCTGCGATGGCCTACGTCGGGCTCGCCGCGCCTGGCCAACCTGCCTCCTGGGCCACGGAGAGCAAGAGGTACCAGTTCTGGACGAGGGCCGCCTCCGACGGCAGCTTCAGCATCGGCGACGTCCGGGAAGGGGTGTACAACCTGTACGCCTGGGTCCCCGGGATCCTTGGCGACTACATGCACACCTTCCCCGTGACGGTAACTCCGGCGGGCGGCGTCGACGTCGGCGACCTCGTGTTCGAGCCCCCGAGGTCGGGCCCCACGCTGTGGGAGATCGGCGTCCCGGACCGGTCGGCGGCGGAGTTCTACGTCCCCGACCCCGACCCGAGGTACGCCAGCAGGCTCTTCCTGACCAAGGACAGGTACAGGCAGTACGGCCTGTGGGAGAGGTACGCCGCCCTCTACCCCGACAGCGACCTCGTGTTCACCGTCGGCGAGAGCAACCACTCCACGGACTGGTTCTTCGCGCATGTCACAAGGAAGGTCGTCGGCGGCAAGGGTGACACCACGGTGGTGCCAACGACATGGCAGATACGCTTCCACCTGGACCGCGTCGTAGCGGGCGGCAACTACACGCTGCGCGTCGCCCTCGCGGCGTCGCACATGTCGAGCCTGCAGGTGCAGGTGAACGGCGGTGGCGGTGACGGCGCCGTCGGCACGCGCGGCGCGCTGGCGGCGGCGTTTCTGATGGGCGACAACAACGCCATCGCGCGGCACGGCATACGCGGCACGGAGTGGAGCCTGGACTTGGGCATCGACGGCCGCCTGCTCATCCGAGGCGACAACACCATCCACATCACCCAGGCGAGCGCCCTGAACCAGTTCGTCGGGGTCATGTACGACTACATTCGCCTCGAGGGCCCTTCCACATAG
Protein:  
MQVVVDNGVVQVSLSRPQGQITGVRYGGGGDQNLLEYNASQGNSGGYWDVVWNYPGSDHPGGTMDMLDGTEFQVVSSSEEQVELSFRSSYNASRPNSVRLNVDKRLVMLRDSSGFYCYAIFEHAREHPALNISVARLAFKLNAAKFNYMAISDGIQRYMPSAADRDPPRGVPLAYKEAVLLVDPVEPEFRGEVDDKYQYSMDNEDNTVHGWIAGSNDDDPAAATGFWVVTPSNEFKNGGPLKRELTSHVGPTSLSVFLGPHYVGRDMVIEFEEGEYWKKVLGPVFIYLNSGRPDSKRGLWEDAKARAQAEVRKWPYDFPRSPDFAKAGERGSVTGRLWVRDGVANKQQQPAAMAYVGLAAPGQPASWATESKRYQFWTRAASDGSFSIGDVREGVYNLYAWVPGILGDYMHTFPVTVTPAGGVDVGDLVFEPPRSGPTLWEIGVPDRSAAEFYVPDPDPRYASRLFLTKDRYRQYGLWERYAALYPDSDLVFTVGESNHSTDWFFAHVTRKVVGGKGDTTVVPTTWQIRFHLDRVVAGGNYTLRVALAASHMSSLQVQVNGGGGDGAVGTRGALAAAFLMGDNNAIARHGIRGTEWSLDLGIDGRLLIRGDNTIHITQASALNQFVGVMYDYIRLEGPST